STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM18527.1Formylmethanofuran dehydrogenase, subunit F. (339 aa)    
Predicted Functional Partners:
SFM18438.1
Formylmethanofuran dehydrogenase, subunit D.
 
 0.994
SFM55742.1
Formylmethanofuran dehydrogenase, subunit G.
 
0.994
SFM18506.1
Formylmethanofuran dehydrogenase, subunit A.
 
 0.986
SFM18420.1
Formylmethanofuran dehydrogenase, subunit B.
 
 0.985
SFM18458.1
Formylmethanofuran dehydrogenase, subunit C.
 
 0.984
SFM55706.1
Formylmethanofuran dehydrogenase, subunit D.
 
 0.946
SFM55724.1
Formylmethanofuran dehydrogenase, subunit B.
 
 0.892
SFM55947.1
Formate dehydrogenase subunit beta.
    
 0.888
SFM83077.1
Formylmethanofuran dehydrogenase subunit C.
  
 0.888
cdhA
acetyl-CoA decarbonylase/synthase alpha subunit; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
  
  
 0.879
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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