STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM19963.1Hypothetical protein. (676 aa)    
Predicted Functional Partners:
SFM49703.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.685
SFM25059.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
  
     0.683
SFM69541.1
Protein of unknown function TPD sequence-motif-containing protein.
  
     0.632
SFM68202.1
Von Willebrand factor type A domain-containing protein.
  
     0.556
SFM47078.1
Uncharacterized conserved protein YfaS, alpha-2-macroglobulin family.
  
     0.522
SFM91783.1
PKD repeat-containing protein.
  
     0.485
SFM19412.1
Tetratricopeptide repeat-containing protein.
  
     0.474
SFM84929.1
ADP-dependent glucokinase.
  
     0.461
SFM69431.1
Hypothetical protein; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base; Belongs to the 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 family.
  
     0.456
SFM19980.1
Thymidylate synthase.
       0.446
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.