STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM20582.1Heme exporter protein A. (248 aa)    
Predicted Functional Partners:
SFM20599.1
Heme exporter protein B.
  
  0.958
SFM50306.1
ABC-2 type transport system permease protein.
  
 0.856
SFM50328.1
ABC-2 type transport system permease protein.
  
 0.856
SFM50507.1
ABC-2 type transport system permease protein.
  
 0.856
SFM20697.1
Heme exporter protein C.
 
  
 0.843
SFM19552.1
ABC-2 type transport system permease protein.
 
 
 0.751
SFM44212.1
ABC-2 type transport system permease protein.
 
 
 0.749
SFM47741.1
Lipooligosaccharide transport system permease protein.
 
 
 0.709
SFM20564.1
Oxidoreductase molybdopterin binding domain-containing protein.
    
  0.611
rpl14
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
 
     0.592
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.