Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM22393.1 | SFM22418.1 | SAMN04488696_0437 | SAMN04488696_0438 | TIGR00288 family protein. | Hypothetical protein. | 0.522 |
SFM22393.1 | SFM22443.1 | SAMN04488696_0437 | SAMN04488696_0439 | TIGR00288 family protein. | Hypothetical protein. | 0.679 |
SFM22393.1 | cdhB | SAMN04488696_0437 | SAMN04488696_0441 | TIGR00288 family protein. | acetyl-CoA decarbonylase/synthase epsilon subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD- mediated CO oxidation. | 0.431 |
SFM22418.1 | SFM22393.1 | SAMN04488696_0438 | SAMN04488696_0437 | Hypothetical protein. | TIGR00288 family protein. | 0.522 |
SFM22418.1 | SFM22443.1 | SAMN04488696_0438 | SAMN04488696_0439 | Hypothetical protein. | Hypothetical protein. | 0.866 |
SFM22443.1 | SFM22393.1 | SAMN04488696_0439 | SAMN04488696_0437 | Hypothetical protein. | TIGR00288 family protein. | 0.679 |
SFM22443.1 | SFM22418.1 | SAMN04488696_0439 | SAMN04488696_0438 | Hypothetical protein. | Hypothetical protein. | 0.866 |
SFM22443.1 | SFM30301.1 | SAMN04488696_0439 | SAMN04488696_0842 | Hypothetical protein. | Sec-independent protein translocase protein TatA. | 0.764 |
SFM22443.1 | SFM32673.1 | SAMN04488696_0439 | SAMN04488696_0978 | Hypothetical protein. | PDZ domain-containing protein. | 0.676 |
SFM22443.1 | SFM49882.1 | SAMN04488696_0439 | SAMN04488696_1496 | Hypothetical protein. | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | 0.699 |
SFM22443.1 | SFM71475.1 | SAMN04488696_0439 | SAMN04488696_2180 | Hypothetical protein. | Signal peptidase, endoplasmic reticulum-type. | 0.588 |
SFM22443.1 | SFM92409.1 | SAMN04488696_0439 | SAMN04488696_2883 | Hypothetical protein. | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | 0.699 |
SFM22443.1 | cdhB | SAMN04488696_0439 | SAMN04488696_0441 | Hypothetical protein. | acetyl-CoA decarbonylase/synthase epsilon subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD- mediated CO oxidation. | 0.595 |
SFM22443.1 | tatA | SAMN04488696_0439 | SAMN04488696_0843 | Hypothetical protein. | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.764 |
SFM22443.1 | tatA-2 | SAMN04488696_0439 | SAMN04488696_1071 | Hypothetical protein. | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.764 |
SFM30301.1 | SFM22443.1 | SAMN04488696_0842 | SAMN04488696_0439 | Sec-independent protein translocase protein TatA. | Hypothetical protein. | 0.764 |
SFM30301.1 | tatA | SAMN04488696_0842 | SAMN04488696_0843 | Sec-independent protein translocase protein TatA. | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.688 |
SFM32673.1 | SFM22443.1 | SAMN04488696_0978 | SAMN04488696_0439 | PDZ domain-containing protein. | Hypothetical protein. | 0.676 |
SFM32673.1 | SFM71475.1 | SAMN04488696_0978 | SAMN04488696_2180 | PDZ domain-containing protein. | Signal peptidase, endoplasmic reticulum-type. | 0.811 |
SFM49882.1 | SFM22443.1 | SAMN04488696_1496 | SAMN04488696_0439 | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | Hypothetical protein. | 0.699 |
page 1 of 2