STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM31964.1Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. (426 aa)    
Predicted Functional Partners:
SFM41628.1
Ribonucleoside-triphosphate reductase class III catalytic subunit.
  
 
  0.851
SFM31947.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.773
SFM31981.1
Hypothetical protein.
       0.751
SFM14446.1
DNA-binding transcriptional regulator, Lrp family.
  
 
 0.563
SFM14463.1
DNA-binding transcriptional regulator, Lrp family.
  
 
 0.560
SFM66602.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
 
  
  0.452
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.