Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM14915.1 | SFM18458.1 | SAMN04488696_0055 | SAMN04488696_0237 | Hypothetical protein. | Formylmethanofuran dehydrogenase, subunit C. | 0.747 |
SFM14915.1 | SFM18506.1 | SAMN04488696_0055 | SAMN04488696_0238 | Hypothetical protein. | Formylmethanofuran dehydrogenase, subunit A. | 0.797 |
SFM14915.1 | SFM55724.1 | SAMN04488696_0055 | SAMN04488696_1583 | Hypothetical protein. | Formylmethanofuran dehydrogenase, subunit B. | 0.760 |
SFM14915.1 | SFM61882.1 | SAMN04488696_0055 | SAMN04488696_1882 | Hypothetical protein. | triphosphoribosyl-dephospho-CoA synthase. | 0.756 |
SFM14915.1 | ftr | SAMN04488696_0055 | SAMN04488696_2199 | Hypothetical protein. | Formylmethanofuran-tetrahydromethanopterin formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family. | 0.781 |
SFM14915.1 | mch | SAMN04488696_0055 | SAMN04488696_0971 | Hypothetical protein. | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. | 0.778 |
SFM14915.1 | mfnB | SAMN04488696_0055 | SAMN04488696_2436 | Hypothetical protein. | Hypothetical protein; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P). | 0.831 |
SFM18458.1 | SFM14915.1 | SAMN04488696_0237 | SAMN04488696_0055 | Formylmethanofuran dehydrogenase, subunit C. | Hypothetical protein. | 0.747 |
SFM18458.1 | SFM18506.1 | SAMN04488696_0237 | SAMN04488696_0238 | Formylmethanofuran dehydrogenase, subunit C. | Formylmethanofuran dehydrogenase, subunit A. | 0.999 |
SFM18458.1 | SFM31350.1 | SAMN04488696_0237 | SAMN04488696_0902 | Formylmethanofuran dehydrogenase, subunit C. | Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.463 |
SFM18458.1 | SFM55724.1 | SAMN04488696_0237 | SAMN04488696_1583 | Formylmethanofuran dehydrogenase, subunit C. | Formylmethanofuran dehydrogenase, subunit B. | 0.988 |
SFM18458.1 | SFM61882.1 | SAMN04488696_0237 | SAMN04488696_1882 | Formylmethanofuran dehydrogenase, subunit C. | triphosphoribosyl-dephospho-CoA synthase. | 0.733 |
SFM18458.1 | ftr | SAMN04488696_0237 | SAMN04488696_2199 | Formylmethanofuran dehydrogenase, subunit C. | Formylmethanofuran-tetrahydromethanopterin formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family. | 0.976 |
SFM18458.1 | mch | SAMN04488696_0237 | SAMN04488696_0971 | Formylmethanofuran dehydrogenase, subunit C. | Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. | 0.809 |
SFM18458.1 | mfnB | SAMN04488696_0237 | SAMN04488696_2436 | Formylmethanofuran dehydrogenase, subunit C. | Hypothetical protein; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P). | 0.744 |
SFM18458.1 | mtd | SAMN04488696_0237 | SAMN04488696_2284 | Formylmethanofuran dehydrogenase, subunit C. | Methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. | 0.450 |
SFM18506.1 | SFM14915.1 | SAMN04488696_0238 | SAMN04488696_0055 | Formylmethanofuran dehydrogenase, subunit A. | Hypothetical protein. | 0.797 |
SFM18506.1 | SFM18458.1 | SAMN04488696_0238 | SAMN04488696_0237 | Formylmethanofuran dehydrogenase, subunit A. | Formylmethanofuran dehydrogenase, subunit C. | 0.999 |
SFM18506.1 | SFM55724.1 | SAMN04488696_0238 | SAMN04488696_1583 | Formylmethanofuran dehydrogenase, subunit A. | Formylmethanofuran dehydrogenase, subunit B. | 0.992 |
SFM18506.1 | SFM61882.1 | SAMN04488696_0238 | SAMN04488696_1882 | Formylmethanofuran dehydrogenase, subunit A. | triphosphoribosyl-dephospho-CoA synthase. | 0.779 |
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