STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM34008.1Acetoin utilization deacetylase AcuC. (676 aa)    
Predicted Functional Partners:
SFM80783.1
Helicase conserved C-terminal domain-containing protein.
   
 0.877
SFM33987.1
Acetoin utilization deacetylase AcuC.
 
    
0.793
rpl40e
LSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
    
  0.788
SFM33966.1
Hypothetical protein.
  
 
 0.764
SFM27770.1
NAD-dependent deacetylase.
   
 
 0.760
SFM84994.1
WD40 repeat.
  
 
 0.739
SFM80164.1
WD domain-containing protein, G-beta repeat-containing protein.
  
 
 0.738
SFM28474.1
Translation initiation factor eIF2A.
  
 
 0.733
SFM30336.1
Hypothetical protein.
  
 
 0.733
SFM59594.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.732
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.