Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM17088.1 | SFM19281.1 | SAMN04488696_0173 | SAMN04488696_0275 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Phosphoadenylylsulfate reductase (thioredoxin). | 0.703 |
SFM17088.1 | SFM19301.1 | SAMN04488696_0173 | SAMN04488696_0276 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Sulfate adenylyltransferase subunit 2. | 0.572 |
SFM17088.1 | SFM70064.1 | SAMN04488696_0173 | SAMN04488696_2108 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Phosphoadenosine phosphosulfate reductase. | 0.637 |
SFM17088.1 | SFM72016.1 | SAMN04488696_0173 | SAMN04488696_2209 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Cysteine synthase A; Non-canonical start codon; manually curated. | 0.406 |
SFM17088.1 | SFM89477.1 | SAMN04488696_0173 | SAMN04488696_2760 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Phosphoadenosine phosphosulfate reductase. | 0.773 |
SFM17088.1 | SFM91974.1 | SAMN04488696_0173 | SAMN04488696_2855 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Cysteine desulfurase. | 0.749 |
SFM17088.1 | hcp-2 | SAMN04488696_0173 | SAMN04488696_1587 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.592 |
SFM19281.1 | SFM17088.1 | SAMN04488696_0275 | SAMN04488696_0173 | Phosphoadenylylsulfate reductase (thioredoxin). | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.703 |
SFM19281.1 | SFM19301.1 | SAMN04488696_0275 | SAMN04488696_0276 | Phosphoadenylylsulfate reductase (thioredoxin). | Sulfate adenylyltransferase subunit 2. | 0.949 |
SFM19281.1 | SFM23846.1 | SAMN04488696_0275 | SAMN04488696_0498 | Phosphoadenylylsulfate reductase (thioredoxin). | Molybdate transport system permease protein. | 0.713 |
SFM19281.1 | SFM70064.1 | SAMN04488696_0275 | SAMN04488696_2108 | Phosphoadenylylsulfate reductase (thioredoxin). | Phosphoadenosine phosphosulfate reductase. | 0.864 |
SFM19281.1 | SFM72016.1 | SAMN04488696_0275 | SAMN04488696_2209 | Phosphoadenylylsulfate reductase (thioredoxin). | Cysteine synthase A; Non-canonical start codon; manually curated. | 0.557 |
SFM19281.1 | SFM89477.1 | SAMN04488696_0275 | SAMN04488696_2760 | Phosphoadenylylsulfate reductase (thioredoxin). | Phosphoadenosine phosphosulfate reductase. | 0.882 |
SFM19281.1 | hcp-2 | SAMN04488696_0275 | SAMN04488696_1587 | Phosphoadenylylsulfate reductase (thioredoxin). | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.638 |
SFM19301.1 | SFM17088.1 | SAMN04488696_0276 | SAMN04488696_0173 | Sulfate adenylyltransferase subunit 2. | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.572 |
SFM19301.1 | SFM19281.1 | SAMN04488696_0276 | SAMN04488696_0275 | Sulfate adenylyltransferase subunit 2. | Phosphoadenylylsulfate reductase (thioredoxin). | 0.949 |
SFM19301.1 | SFM23846.1 | SAMN04488696_0276 | SAMN04488696_0498 | Sulfate adenylyltransferase subunit 2. | Molybdate transport system permease protein. | 0.713 |
SFM19301.1 | SFM70064.1 | SAMN04488696_0276 | SAMN04488696_2108 | Sulfate adenylyltransferase subunit 2. | Phosphoadenosine phosphosulfate reductase. | 0.861 |
SFM19301.1 | SFM72016.1 | SAMN04488696_0276 | SAMN04488696_2209 | Sulfate adenylyltransferase subunit 2. | Cysteine synthase A; Non-canonical start codon; manually curated. | 0.557 |
SFM19301.1 | SFM89477.1 | SAMN04488696_0276 | SAMN04488696_2760 | Sulfate adenylyltransferase subunit 2. | Phosphoadenosine phosphosulfate reductase. | 0.948 |
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