STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM57709.1S-layer family duplication domain-containing protein. (867 aa)    
Predicted Functional Partners:
SFM61518.1
CoB-CoM heterodisulfide reductase, subunit E.
  
     0.740
SFM24277.1
Von Willebrand factor type A domain-containing protein.
  
     0.723
SFM24298.1
N-terminal double-transmembrane domain-containing protein.
  
     0.713
SFM80506.1
Uncharacterized conserved protein.
  
     0.674
SFM18105.1
Hypothetical protein.
  
     0.669
SFM46240.1
Phytoene dehydrogenase-related protein.
  
     0.663
SFM57616.1
Hypothetical protein.
 
     0.656
SFM18123.1
Hypothetical protein.
  
     0.649
SFM79593.1
Hypothetical protein.
  
     0.642
SFM88824.1
Hypothetical protein.
  
     0.621
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.