Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM58290.1 | SFM69124.1 | SAMN04488696_1712 | SAMN04488696_2067 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | 5-oxoprolinase (ATP-hydrolysing). | 0.854 |
SFM58290.1 | SFM71055.1 | SAMN04488696_1712 | SAMN04488696_2155 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Trimethylamine:corrinoid methyltransferase; Manually curated; Belongs to the trimethylamine methyltransferase family. | 0.429 |
SFM58290.1 | SFM89446.1 | SAMN04488696_1712 | SAMN04488696_2759 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Sulfide dehydrogenase (flavoprotein) subunit SudA. | 0.834 |
SFM69124.1 | SFM58290.1 | SAMN04488696_2067 | SAMN04488696_1712 | 5-oxoprolinase (ATP-hydrolysing). | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | 0.854 |
SFM69124.1 | SFM89446.1 | SAMN04488696_2067 | SAMN04488696_2759 | 5-oxoprolinase (ATP-hydrolysing). | Sulfide dehydrogenase (flavoprotein) subunit SudA. | 0.923 |
SFM71055.1 | SFM58290.1 | SAMN04488696_2155 | SAMN04488696_1712 | Trimethylamine:corrinoid methyltransferase; Manually curated; Belongs to the trimethylamine methyltransferase family. | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | 0.429 |
SFM71055.1 | SFM89446.1 | SAMN04488696_2155 | SAMN04488696_2759 | Trimethylamine:corrinoid methyltransferase; Manually curated; Belongs to the trimethylamine methyltransferase family. | Sulfide dehydrogenase (flavoprotein) subunit SudA. | 0.674 |
SFM89446.1 | SFM58290.1 | SAMN04488696_2759 | SAMN04488696_1712 | Sulfide dehydrogenase (flavoprotein) subunit SudA. | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | 0.834 |
SFM89446.1 | SFM69124.1 | SAMN04488696_2759 | SAMN04488696_2067 | Sulfide dehydrogenase (flavoprotein) subunit SudA. | 5-oxoprolinase (ATP-hydrolysing). | 0.923 |
SFM89446.1 | SFM71055.1 | SAMN04488696_2759 | SAMN04488696_2155 | Sulfide dehydrogenase (flavoprotein) subunit SudA. | Trimethylamine:corrinoid methyltransferase; Manually curated; Belongs to the trimethylamine methyltransferase family. | 0.674 |