STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM59200.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
SFM15328.1
F420H2 dehydrogenase subunit D.
 
 
  0.934
SFM15309.1
F420H2 dehydrogenase subunit C.
  
 
  0.924
SFM59183.1
Hypothetical protein.
 
    0.924
SFM89477.1
Phosphoadenosine phosphosulfate reductase.
    
  0.830
SFM59165.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.686
SFM59037.1
Protein of unknown function.
 
    0.645
SFM58944.1
Hypothetical protein; Belongs to the LarC family.
 
    0.613
SFM59130.1
4-carboxymuconolactone decarboxylase.
 
     0.540
SFM29239.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
   
 
  0.535
SFM59020.1
Hypothetical protein.
 
    0.480
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.