STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM60349.1Rubrerythrin. (163 aa)    
Predicted Functional Partners:
SFM61834.1
Glutamate dehydrogenase (NAD/NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.817
SFM58724.1
Fur family transcriptional regulator, ferric uptake regulator.
 
  
 0.701
SFM17184.1
Superoxide reductase.
 
  
 0.649
SFM45943.1
Rubrerythrin.
  
  
 0.641
SFM57299.1
3-Cys thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.614
SFM58748.1
3-Cys thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.614
SFM45961.1
Flavorubredoxin.
 
  
 0.554
SFM55926.1
Molybdopterin oxidoreductase Fe4S4 domain-containing protein.
   
 
 0.543
SFM29223.1
PhnB protein.
    
 0.518
SFM59316.1
Thioredoxin reductase (NADPH).
 
   
 0.504
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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