STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM69386.14Fe-4S binding domain-containing protein. (244 aa)    
Predicted Functional Partners:
SFM15374.1
F420H2 dehydrogenase subunit I.
  
 
 0.653
SFM69411.1
Putative protease.
  
    0.568
SFM55926.1
Molybdopterin oxidoreductase Fe4S4 domain-containing protein.
  
  
 0.548
SFM60393.1
Cytochrome c, mono-and diheme variants.
  
  
 0.548
SFM69431.1
Hypothetical protein; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base; Belongs to the 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 family.
       0.540
SFM27575.1
Ketoisovalerate ferredoxin oxidoreductase, delta subunit.
  
 
 0.528
SFM45773.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.528
SFM55778.1
Mannose-6-phosphate isomerase, cupin superfamily.
 
  
 0.507
SFM93833.1
Mannose-6-phosphate isomerase, cupin superfamily.
 
  
 0.505
SFM69452.1
SigmaK-factor processing regulatory protein BofA.
       0.438
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.