STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM72457.1Pyruvate ferredoxin oxidoreductase, beta subunit. (291 aa)    
Predicted Functional Partners:
SFM72471.1
Pyruvate ferredoxin oxidoreductase, alpha subunit.
 0.999
SFM72500.1
Pyruvate ferredoxin oxidoreductase, delta subunit.
 
 0.999
SFM72525.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
 
 0.999
SFM18660.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 0.979
SFM27591.1
Ketoisovalerate ferredoxin oxidoreductase, alpha subunit.
 
 0.979
SFM85354.1
Acetyltransferase.
    
 0.954
SFM27608.1
Ketoisovalerate ferredoxin oxidoreductase, beta subunit /ketoisovalerate ferredoxin oxidoreductase, gamma subunit.
  
 0.946
SFM89446.1
Sulfide dehydrogenase (flavoprotein) subunit SudA.
  
 
 0.940
cdhC
acetyl-CoA decarbonylase/synthase beta subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron- sulfur protein (the gamma-delta complex).
   
 
 0.921
SFM31888.1
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.900
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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