STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM79442.1Protein N-acetyltransferase, RimJ/RimL family. (179 aa)    
Predicted Functional Partners:
SFM68935.1
Agmatinase; Belongs to the arginase family.
   
 
 0.799
SFM70342.1
Pathogenicity locus.
 
     0.788
SFM33158.1
Ribosomal-protein-alanine N-acetyltransferase.
  
  
  0.773
SFM79452.1
Hypothetical protein.
       0.736
SFM79471.1
Cu+-exporting ATPase.
       0.711
SFM24828.1
RNAse III.
  
    0.671
SFM30164.1
Ribonuclease-3.
  
    0.671
SFM89057.1
Acetyltransferase (GNAT) domain-containing protein.
  
  
  0.646
SFM79493.1
Copper chaperone.
     
 0.598
SFM88972.1
Pseudaminic acid synthase.
  
 
 0.596
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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