STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM85609.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
SFM80067.1
Predicted transcriptional regulator.
  
     0.696
SFM19759.1
Predicted transcriptional regulator.
  
     0.685
SFM85591.1
tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA.
       0.683
SFM33625.1
Predicted transcriptional regulator.
  
     0.675
SFM85628.1
Predicted DNA-binding transcriptional regulator, ArsR family.
 
     0.650
SFM85575.1
Carbon-nitrogen hydrolase.
       0.646
mptD
Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.593
SFM88682.1
Flagellar protein FlaD.
  
     0.541
SFM27498.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
  
     0.525
SFM44884.1
5S rRNA maturation endonuclease (Ribonuclease M5), contains TOPRIM domain; Belongs to the UPF0292 family.
  
     0.516
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.