STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM85795.1His Kinase A (phospho-acceptor) domain-containing protein. (326 aa)    
Predicted Functional Partners:
SFM20229.1
Response regulator receiver domain-containing protein.
 0.966
SFM80621.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.934
SFM56506.1
PAS domain S-box-containing protein.
 
0.930
SFM24258.1
PAS domain S-box-containing protein.
 
0.908
SFM20264.1
PAS domain S-box-containing protein.
 
0.906
SFM21995.1
PAS domain S-box-containing protein.
 
0.906
SFM29714.1
Hypothetical protein.
 
0.905
SFM45463.1
PAS domain S-box-containing protein.
 
0.905
SFM60281.1
PAS domain S-box-containing protein.
 
0.904
SFM17379.1
Two-component system, cell cycle response regulator.
 0.893
Your Current Organism:
Methanolobus profundi
NCBI taxonomy Id: 487685
Other names: DSM 21213, M. profundi, Methanolobus profundi Mochimaru et al. 2009, Methanolobus sp. MobM, NBRC 104158, strain Mob M, strain MobM
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.