STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG40845.1PFAM: peptidase M20; peptidase M28; KEGG: gfo:GFO_0513 peptidase, family M28. (448 aa)    
Predicted Functional Partners:
EEG40842.1
PFAM: phosphoesterase PA-phosphatase related; KEGG: fjo:Fjoh_1775 phosphoesterase, PA-phosphatase related.
       0.752
EEG40843.1
KEGG: gfo:GFO_0515 hypothetical protein.
       0.752
EEG40844.1
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: fps:FP0569 multidrug resistance protein NorM (Na(+)/drug antiporter).
       0.752
EEG40846.1
Putative two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: fps:FP0667 probable sigma-54 dependent two-component system response regulatory protein.
       0.647
EEG41131.1
KEGG: gfo:GFO_2677 hypothetical protein.
  
     0.573
EEG41853.1
KEGG: shm:Shewmr7_0115 hypothetical protein.
  
     0.440
EEG42014.1
KEGG: gfo:GFO_2724 secreted aminopeptidase.
  
 
  0.427
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.