STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG40853.1PFAM: Mammalian cell entry related domain protein; KEGG: fjo:Fjoh_4584 mammalian cell entry related domain protein. (311 aa)    
Predicted Functional Partners:
EEG42054.1
PFAM: protein of unknown function DUF140; KEGG: fjo:Fjoh_0449 protein of unknown function DUF140.
 
 0.992
EEG42053.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fps:FP1379 probable ABC-type transport system, ATPase component.
 
 0.977
EEG42220.1
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: hau:Haur_1422 anti-sigma-factor antagonist.
  
  0.961
EEG40852.1
KEGG: fjo:Fjoh_4583 Fe-S oxidoreductase-like protein.
       0.792
EEG40849.1
KEGG: fjo:Fjoh_4581 hypothetical protein.
 
     0.788
EEG40850.1
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: fps:FP0756 probable Fe-S oxidoreductase C-terminal region.
       0.759
EEG40851.1
KEGG: nve:NEMVE_v1g224565 hypothetical protein Pfam: Acid_phosphat_B.
       0.759
EEG41075.1
PFAM: OmpA/MotB domain protein; KEGG: gfo:GFO_2317 OmpA/MotB family outer membrane protein.
 
 
   0.727
EEG40854.1
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: gfo:GFO_1639 N-acetylmuramoyl-L-alanine amidase.
 
     0.719
EEG41649.1
PFAM: OmpA/MotB domain protein; KEGG: gfo:GFO_3537 OmpA/MotB family outer membrane protein.
   
   0.683
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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