STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG41077.1KEGG: gfo:GFO_2315 hypothetical protein. (149 aa)    
Predicted Functional Partners:
EEG41076.1
PFAM: glycosyl transferase family 2; KEGG: fjo:Fjoh_2920 glycosyl transferase, family 2.
 
     0.854
EEG40768.1
KEGG: gfo:GFO_0649 hypothetical protein.
  
     0.773
EEG41078.1
TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: gfo:GFO_2314 DNA polymerase III subunit delta.
 
     0.708
EEG41075.1
PFAM: OmpA/MotB domain protein; KEGG: gfo:GFO_2317 OmpA/MotB family outer membrane protein.
 
     0.689
EEG41359.1
KEGG: gfo:GFO_3340 protein containing DUF177.
  
     0.688
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
  0.683
EEG42329.1
KEGG: fps:FP2013 hypothetical protein.
  
     0.665
EEG41088.1
PFAM: Uroporphyrinogen III synthase HEM4; KEGG: gfo:GFO_0106 uroporphyrinogen-III synthase.
  
     0.659
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.588
EEG41799.1
PFAM: GH3 auxin-responsive promoter; KEGG: fps:FP0403 hypothetical protein.
  
     0.588
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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