STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG41130.1PFAM: Radical SAM domain protein; KEGG: gfo:GFO_3602 radical SAM superfamily protein. (351 aa)    
Predicted Functional Partners:
EEG41129.1
Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.946
EEG41928.1
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
    
 0.842
EEG41125.1
PFAM: Methyltransferase type 11; KEGG: gfo:GFO_3611 protein containing SAM-binding motif.
     0.841
EEG41127.1
KEGG: gfo:GFO_3609 hypothetical protein.
 
     0.825
EEG41123.1
PFAM: glycosyl transferase family 2; KEGG: gfo:GFO_3613 glycosyl transferase, family 2.
 
     0.781
EEG41131.1
KEGG: gfo:GFO_2677 hypothetical protein.
       0.773
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.704
EEG42221.1
Adenylate/guanylate cyclase with GAF and PAS/PAC sensors; TIGRFAM: PAS sensor protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; PAS fold domain protein; KEGG: swi:Swit_1477 putative adenylate/guanylate cyclase.
   
 
  0.688
EEG41929.1
TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdopterin cofactor biosynthesis MoaC region; KEGG: fjo:Fjoh_4637 bifunctional molybdenum cofactor biosynthesis protein C/molybdopterin-binding protein.
    
 0.672
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
   
 
 0.585
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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