STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG41143.1KEGG: fjo:Fjoh_1928 hypothetical protein. (174 aa)    
Predicted Functional Partners:
EEG41144.1
KEGG: fjo:Fjoh_1928 hypothetical protein.
     0.989
EEG41142.1
PFAM: Rhodanese domain protein; KEGG: fjo:Fjoh_4870 rhodanese domain protein.
       0.634
EEG41145.1
KEGG: gfo:GFO_2393 hypothetical protein.
       0.502
EEG41147.1
KEGG: gfo:GFO_2390 conserved hypothetical protein, membrane or secreted.
 
     0.491
EEG42048.1
KEGG: gfo:GFO_2891 conserved hypothetical protein, secreted.
  
     0.486
EEG41720.1
KEGG: gfo:GFO_0182 conserved hypothetical protein, secreted.
  
     0.469
EEG40788.1
PFAM: protein of unknown function DUF1599; KEGG: fps:FP1426 hypothetical protein.
  
     0.465
EEG41140.1
PFAM: YceI family protein; KEGG: fjo:Fjoh_4888 hypothetical protein; Belongs to the UPF0312 family.
       0.449
EEG41141.1
PFAM: regulatory protein MarR; KEGG: gfo:GFO_2665 MarR family transcriptional regulator protein.
       0.449
EEG40770.1
KEGG: gfo:GFO_0651 conserved hypothetical protein, secreted.
  
     0.431
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.