EEG41359.1 protein (Flavobacteria bacterium MS0242A)

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Score

EEG41359.1

KEGG: gfo:GFO_3340 protein containing DUF177. (173 aa)

Predicted Functional Partners:

rpmF

0.970

rpsC

0.913

rplK

0.871

rpsP

0.866

rplA

0.858

rpsF

0.848

rpsB

0.847

rplM

0.844

EEG40809.1

0.841

rplU

0.840

Your Current Organism:

Flavobacteria bacterium MS0242A

NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEG40809.1	EEG41359.1	Flav2ADRAFT_0113	Flav2ADRAFT_0663	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	KEGG: gfo:GFO_3340 protein containing DUF177.	0.841
EEG40809.1	rplA	Flav2ADRAFT_0113	Flav2ADRAFT_0463	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.899
EEG40809.1	rplK	Flav2ADRAFT_0113	Flav2ADRAFT_0462	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.894
EEG40809.1	rplM	Flav2ADRAFT_0113	Flav2ADRAFT_0048	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.924
EEG40809.1	rplU	Flav2ADRAFT_0113	Flav2ADRAFT_0010	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.890
EEG40809.1	rpmF	Flav2ADRAFT_0113	Flav2ADRAFT_0662	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: fps:FP2380 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.858
EEG40809.1	rpsB	Flav2ADRAFT_0113	Flav2ADRAFT_0050	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	PFAM: ribosomal protein S2; KEGG: fjo:Fjoh_1610 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.970
EEG40809.1	rpsC	Flav2ADRAFT_0113	Flav2ADRAFT_1436	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.962
EEG40809.1	rpsF	Flav2ADRAFT_0113	Flav2ADRAFT_1512	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.964
EEG40809.1	rpsP	Flav2ADRAFT_0113	Flav2ADRAFT_1099	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	PFAM: ribosomal protein S16; KEGG: fjo:Fjoh_1301 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.941
EEG41359.1	EEG40809.1	Flav2ADRAFT_0663	Flav2ADRAFT_0113	KEGG: gfo:GFO_3340 protein containing DUF177.	PFAM: initiation factor 3; KEGG: gfo:GFO_0604 translation initiation factor IF-3; Belongs to the IF-3 family.	0.841
EEG41359.1	rplA	Flav2ADRAFT_0663	Flav2ADRAFT_0463	KEGG: gfo:GFO_3340 protein containing DUF177.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.858
EEG41359.1	rplK	Flav2ADRAFT_0663	Flav2ADRAFT_0462	KEGG: gfo:GFO_3340 protein containing DUF177.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.871
EEG41359.1	rplM	Flav2ADRAFT_0663	Flav2ADRAFT_0048	KEGG: gfo:GFO_3340 protein containing DUF177.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.844
EEG41359.1	rplU	Flav2ADRAFT_0663	Flav2ADRAFT_0010	KEGG: gfo:GFO_3340 protein containing DUF177.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.840
EEG41359.1	rpmF	Flav2ADRAFT_0663	Flav2ADRAFT_0662	KEGG: gfo:GFO_3340 protein containing DUF177.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: fps:FP2380 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.970
EEG41359.1	rpsB	Flav2ADRAFT_0663	Flav2ADRAFT_0050	KEGG: gfo:GFO_3340 protein containing DUF177.	PFAM: ribosomal protein S2; KEGG: fjo:Fjoh_1610 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.847
EEG41359.1	rpsC	Flav2ADRAFT_0663	Flav2ADRAFT_1436	KEGG: gfo:GFO_3340 protein containing DUF177.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.913
EEG41359.1	rpsF	Flav2ADRAFT_0663	Flav2ADRAFT_1512	KEGG: gfo:GFO_3340 protein containing DUF177.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.848
EEG41359.1	rpsP	Flav2ADRAFT_0663	Flav2ADRAFT_1099	KEGG: gfo:GFO_3340 protein containing DUF177.	PFAM: ribosomal protein S16; KEGG: fjo:Fjoh_1301 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.866