STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG41398.1PFAM: short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: fjo:Fjoh_4121 short-chain dehydrogenase/reductase SDR. (260 aa)    
Predicted Functional Partners:
EEG41397.1
KEGG: fjo:Fjoh_4120 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase.
 
  0.916
EEG41392.1
PFAM: protein of unknown function DUF718; KEGG: fjo:Fjoh_2046 protein of unknown function DUF718.
 
    0.886
EEG41321.1
PFAM: MaoC domain protein dehydratase; KEGG: rso:RSc2042 hypothetical protein.
  
 0.854
EEG41395.1
PFAM: amidohydrolase 2; KEGG: fjo:Fjoh_4117 amidohydrolase 2.
 
 
  0.851
EEG41105.1
PFAM: ferredoxin; KEGG: fjo:Fjoh_1324 ferredoxin.
   
  0.816
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
 0.800
EEG41396.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: oan:Oant_0318 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
 
  0.795
EEG40725.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: chu:CHU_3591 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase.
  
 0.792
EEG41394.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_3136 short chain dehydrogenase.
 
    
0.787
EEG41898.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: fjo:Fjoh_2161 glutamate synthase (ferredoxin).
     
 0.780
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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