STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG41597.1TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: fjo:Fjoh_1343 thioredoxin; Belongs to the thioredoxin family. (105 aa)    
Predicted Functional Partners:
EEG41846.1
KEGG: gfo:GFO_0987 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 0.978
EEG41104.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gfo:GFO_0125 thioredoxin reductase.
  
  0.731
EEG41326.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gfo:GFO_0376 FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
  0.731
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
    
   0.715
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.705
EEG41898.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: fjo:Fjoh_2161 glutamate synthase (ferredoxin).
    
 
 0.656
EEG41596.1
KEGG: gfo:GFO_3028 DNA polymerase III subunit alpha-1; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; SMART: phosphoesterase PHP domain protein; Exonuclease.
  
    0.614
EEG40858.1
KEGG: fjo:Fjoh_4590 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.596
EEG40761.1
KEGG: gfo:GFO_0629 low molecular weight phosphotyrosine protein phosphatase.
  
   0.561
EEG41754.1
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: lbi:LEPBI_I2872 arsenate reductase (arsenical pump modifier).
  
   0.561
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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