STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG41649.1PFAM: OmpA/MotB domain protein; KEGG: gfo:GFO_3537 OmpA/MotB family outer membrane protein. (298 aa)    
Predicted Functional Partners:
EEG41578.1
OmpA/MotB domain protein; PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: gfo:GFO_3374 OmpA/MotB family outer membrane protein containing thrombospondin 3 repeats.
  
 
  0.832
EEG41427.1
OmpA/MotB domain protein; PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: fps:FP1920 probable outer membrane protein, OmpA family.
  
 
  0.775
EEG41648.1
Exodeoxyribonuclease III Xth; KEGG: gfo:GFO_3536 exodeoxyribonuclease; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.
       0.774
EEG41650.1
PFAM: aldo/keto reductase; KEGG: gfo:GFO_3538 aldo/keto reductase family protein.
       0.773
EEG40853.1
PFAM: Mammalian cell entry related domain protein; KEGG: fjo:Fjoh_4584 mammalian cell entry related domain protein.
   
   0.683
EEG42097.1
OmpA/MotB domain protein; PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: gfo:GFO_3374 OmpA/MotB family outer membrane protein containing thrombospondin 3 repeats.
  
 
  0.676
EEG41647.1
Hypothetical protein.
       0.560
EEG41890.1
KEGG: gfo:GFO_2924 hypothetical protein.
  
 
   0.560
EEG41885.1
PFAM: OmpA/MotB domain protein; KEGG: abo:ABO_1992 hypothetical protein.
    
  0.534
EEG41237.1
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
   0.528
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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