STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG41739.1KEGG: hch:HCH_04393 hypothetical protein. (323 aa)    
Predicted Functional Partners:
EEG41740.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: chu:CHU_1425 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.737
EEG40882.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: fjo:Fjoh_2340 helix-turn-helix-domain containing protein, AraC type.
 
     0.700
EEG41741.1
PFAM: peptidase M22 glycoprotease; KEGG: gfo:GFO_0202 peptidase, family M22.
       0.680
EEG42374.1
KEGG: fjo:Fjoh_1436 hypothetical protein.
  
     0.641
EEG41738.1
PFAM: outer membrane efflux protein; KEGG: gfo:GFO_0200 HlyD family secretion protein.
 
     0.601
EEG42401.1
PFAM: amidohydrolase 2; KEGG: cak:Caul_0314 amidohydrolase 2.
  
    0.556
EEG41298.1
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: gfo:GFO_1507 acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.513
EEG41006.1
PFAM: FAD linked oxidase domain protein; KEGG: fjo:Fjoh_2129 D-lactate dehydrogenase (cytochrome).
   
  0.487
EEG40996.1
PFAM: amidohydrolase 2; KEGG: aba:Acid345_0658 amidohydrolase 2.
  
    0.439
EEG41778.1
KEGG: sus:Acid_1866 xylose isomerase domain protein TIM barrel.
  
     0.429
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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