Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEG40821.1 | EEG41028.1 | Flav2ADRAFT_0125 | Flav2ADRAFT_0256 | KEGG: fps:FP1601 O-succinylbenzoate--CoA ligase. | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein. | 0.689 |
| EEG40821.1 | EEG41675.1 | Flav2ADRAFT_0125 | Flav2ADRAFT_0979 | KEGG: fps:FP1601 O-succinylbenzoate--CoA ligase. | PFAM: heat shock protein DnaJ domain protein; KEGG: gfo:GFO_3208 protein containing DUF1332 and DnaJ domain. | 0.867 |
| EEG40821.1 | EEG41828.1 | Flav2ADRAFT_0125 | Flav2ADRAFT_1133 | KEGG: fps:FP1601 O-succinylbenzoate--CoA ligase. | KEGG: rme:Rmet_4289 nucleoside-diphosphate-sugar epimerase. | 0.829 |
| EEG40821.1 | acpP | Flav2ADRAFT_0125 | Flav2ADRAFT_0875 | KEGG: fps:FP1601 O-succinylbenzoate--CoA ligase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.974 |
| EEG40821.1 | rnhB | Flav2ADRAFT_0125 | Flav2ADRAFT_1196 | KEGG: fps:FP1601 O-succinylbenzoate--CoA ligase. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.683 |
| EEG40955.1 | EEG41573.1 | Flav2ADRAFT_0333 | Flav2ADRAFT_0877 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.596 |
| EEG40955.1 | acpP | Flav2ADRAFT_0333 | Flav2ADRAFT_0875 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.481 |
| EEG40955.1 | polA | Flav2ADRAFT_0333 | Flav2ADRAFT_0047 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
| EEG40955.1 | rnhB | Flav2ADRAFT_0333 | Flav2ADRAFT_1196 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.864 |
| EEG40955.1 | thyA | Flav2ADRAFT_0333 | Flav2ADRAFT_1257 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.755 |
| EEG41028.1 | EEG40821.1 | Flav2ADRAFT_0256 | Flav2ADRAFT_0125 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein. | KEGG: fps:FP1601 O-succinylbenzoate--CoA ligase. | 0.689 |
| EEG41028.1 | EEG41675.1 | Flav2ADRAFT_0256 | Flav2ADRAFT_0979 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein. | PFAM: heat shock protein DnaJ domain protein; KEGG: gfo:GFO_3208 protein containing DUF1332 and DnaJ domain. | 0.736 |
| EEG41028.1 | EEG41828.1 | Flav2ADRAFT_0256 | Flav2ADRAFT_1133 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein. | KEGG: rme:Rmet_4289 nucleoside-diphosphate-sugar epimerase. | 0.996 |
| EEG41028.1 | acpP | Flav2ADRAFT_0256 | Flav2ADRAFT_0875 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.993 |
| EEG41028.1 | rnhB | Flav2ADRAFT_0256 | Flav2ADRAFT_1196 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gfo:GFO_1472 ferredoxin-like protein. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.688 |
| EEG41270.1 | rnhB | Flav2ADRAFT_0574 | Flav2ADRAFT_1196 | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.813 |
| EEG41573.1 | EEG40955.1 | Flav2ADRAFT_0877 | Flav2ADRAFT_0333 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.596 |
| EEG41573.1 | acpP | Flav2ADRAFT_0877 | Flav2ADRAFT_0875 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.532 |
| EEG41573.1 | polA | Flav2ADRAFT_0877 | Flav2ADRAFT_0047 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.854 |
| EEG41573.1 | rnhB | Flav2ADRAFT_0877 | Flav2ADRAFT_1196 | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.766 |
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