STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG41939.1N-acyl-D-amino-acid deacylase; PFAM: D-aminoacylase domain protein; Amidohydrolase 3; KEGG: sal:Sala_1467 N-acyl-D-amino-acid deacylase. (539 aa)    
Predicted Functional Partners:
EEG41937.1
KEGG: bld:BLi02522 hypothetical protein.
       0.773
EEG41938.1
PFAM: protein of unknown function DUF885; KEGG: gfo:GFO_0062 secreted protein containing DUF885.
       0.773
EEG42384.1
PFAM: Amidohydrolase 3; KEGG: gfo:GFO_2539 secreted amidohydrolase.
 
     0.648
EEG41940.1
KEGG: gfo:GFO_3527 membrane protein.
       0.631
EEG41936.1
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: gfo:GFO_0444 molybdenum-dependent oxidoreductase iron-sulfur binding subunit.
       0.602
EEG41935.1
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: gfo:GFO_0445 molybdenum-dependent oxidoreductase molybdenum-binding subunit.
       0.582
EEG41213.1
PFAM: Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: sru:SRU_0368 beta-N-acetylhexosaminidase.
 
  
  0.458
EEG41941.1
KEGG: gfo:GFO_3525 hypothetical protein.
       0.451
EEG41928.1
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.439
EEG41929.1
TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdopterin cofactor biosynthesis MoaC region; KEGG: fjo:Fjoh_4637 bifunctional molybdenum cofactor biosynthesis protein C/molybdopterin-binding protein.
       0.439
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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