STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG42017.1KEGG: gfo:GFO_2714 protein containing FMN-binding split barrel domain. (206 aa)    
Predicted Functional Partners:
EEG42016.1
PFAM: O-methyltransferase family 3; KEGG: fjo:Fjoh_1776 O-methyltransferase, family 3.
       0.773
EEG41433.1
PFAM: Luciferase-like monooxygenase; KEGG: fjo:Fjoh_3319 luciferase family protein.
  
 
 0.704
EEG42325.1
KEGG: fps:FP2038 hypothetical protein.
 
     0.671
EEG42018.1
Hypothetical protein.
       0.648
EEG42261.1
PFAM: nitroreductase; KEGG: chu:CHU_1678 NAD(P)H-flavin oxidoreductase.
  
 
 0.628
EEG40993.1
KEGG: gfo:GFO_1512 hypothetical protein.
    
  0.570
EEG41760.1
TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: gfo:GFO_3504 riboflavin kinase / FAD synthetase; Belongs to the ribF family.
    
  0.565
EEG41126.1
Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.561
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
  0.550
EEG41362.1
TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: fjo:Fjoh_0650 riboflavin synthase subunit alpha.
    
  0.533
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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