STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG42057.1KEGG: fjo:Fjoh_0444 hypothetical protein. (248 aa)    
Predicted Functional Partners:
EEG42058.1
PFAM: Rhodanese domain protein; KEGG: fps:FP2000 thioredoxin family protein.
       0.762
EEG41728.1
KEGG: gfo:GFO_0191 conserved hypothetical protein, membrane.
  
     0.737
EEG41729.1
KEGG: gfo:GFO_0192 membrane or secreted protein.
  
     0.730
EEG42187.1
KEGG: gfo:GFO_1072 membrane protein.
  
     0.727
EEG41348.1
KEGG: gfo:GFO_3355 hypothetical protein.
  
     0.705
EEG42351.1
KEGG: fps:FP0466 hypothetical protein.
  
     0.694
EEG42198.1
KEGG: gfo:GFO_1098 secreted protein.
  
     0.693
EEG41080.1
KEGG: fjo:Fjoh_4511 hypothetical protein.
  
     0.690
EEG40814.1
KEGG: gfo:GFO_1806 hypothetical protein.
  
     0.674
EEG41170.1
KEGG: gfo:GFO_2355 hypothetical protein.
  
     0.674
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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