node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEG41310.1 | EEG41972.1 | Flav2ADRAFT_0614 | Flav2ADRAFT_1280 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: gfo:GFO_3573 ribonuclease G. | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | 0.851 |
EEG41310.1 | EEG42212.1 | Flav2ADRAFT_0614 | Flav2ADRAFT_1520 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: gfo:GFO_3573 ribonuclease G. | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.851 |
EEG41310.1 | infB | Flav2ADRAFT_0614 | Flav2ADRAFT_1004 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: gfo:GFO_3573 ribonuclease G. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.511 |
EEG41310.1 | pnp | Flav2ADRAFT_0614 | Flav2ADRAFT_1408 | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: gfo:GFO_3573 ribonuclease G. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.969 |
EEG41972.1 | EEG41310.1 | Flav2ADRAFT_1280 | Flav2ADRAFT_0614 | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: gfo:GFO_3573 ribonuclease G. | 0.851 |
EEG41972.1 | fusA | Flav2ADRAFT_1280 | Flav2ADRAFT_1428 | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.925 |
EEG41972.1 | infB | Flav2ADRAFT_1280 | Flav2ADRAFT_1004 | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.549 |
EEG41972.1 | pnp | Flav2ADRAFT_1280 | Flav2ADRAFT_1408 | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.921 |
EEG41972.1 | rnr | Flav2ADRAFT_1280 | Flav2ADRAFT_0797 | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.482 |
EEG41972.1 | rplA | Flav2ADRAFT_1280 | Flav2ADRAFT_0463 | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.642 |
EEG41972.1 | rplB | Flav2ADRAFT_1280 | Flav2ADRAFT_1433 | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.730 |
EEG42212.1 | EEG41310.1 | Flav2ADRAFT_1520 | Flav2ADRAFT_0614 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: gfo:GFO_3573 ribonuclease G. | 0.851 |
EEG42212.1 | fusA | Flav2ADRAFT_1520 | Flav2ADRAFT_1428 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.925 |
EEG42212.1 | infB | Flav2ADRAFT_1520 | Flav2ADRAFT_1004 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.549 |
EEG42212.1 | pnp | Flav2ADRAFT_1520 | Flav2ADRAFT_1408 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.921 |
EEG42212.1 | rnr | Flav2ADRAFT_1520 | Flav2ADRAFT_0797 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.482 |
EEG42212.1 | rplA | Flav2ADRAFT_1520 | Flav2ADRAFT_0463 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.642 |
EEG42212.1 | rplB | Flav2ADRAFT_1520 | Flav2ADRAFT_1433 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.730 |
fusA | EEG41972.1 | Flav2ADRAFT_1428 | Flav2ADRAFT_1280 | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: chu:CHU_2570 possible ATP-dependent RNA helicase. | 0.925 |
fusA | EEG42212.1 | Flav2ADRAFT_1428 | Flav2ADRAFT_1520 | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gfo:GFO_1099 DeaD-like DEAD box family ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.925 |