STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG42186.1PFAM: Lytic transglycosylase catalytic; KEGG: gfo:GFO_1070 membrane-bound lytic murein transglycosylase. (304 aa)    
Predicted Functional Partners:
EEG42185.1
KEGG: fjo:Fjoh_0102 hypothetical protein.
       0.684
EEG40854.1
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: gfo:GFO_1639 N-acetylmuramoyl-L-alanine amidase.
 
  
 0.661
EEG41723.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
     0.626
EEG41724.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
     0.625
EEG41482.1
KEGG: gfo:GFO_3292 hypothetical protein.
 
  
 0.597
EEG41281.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gfo:GFO_2979 secreted protein containing tetratricopeptide repeats.
  
     0.505
EEG42184.1
KEGG: gfo:GFO_1067 hypothetical protein.
       0.489
EEG41507.1
PFAM: protein of unknown function DUF214; KEGG: gfo:GFO_3333 LolC-like FtsX family membrane protein (predicted permease).
  
     0.451
EEG41344.1
PFAM: Peptidase M23; KEGG: gfo:GFO_3167 peptidase, family M23.
  
     0.440
EEG42162.1
PFAM: protein of unknown function DUF214; KEGG: fps:FP2195 probable ABC-type transport system, permease component.
  
     0.437
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
Server load: low (20%) [HD]