STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG42217.1PFAM: WD40 domain protein beta Propeller; KEGG: chu:CHU_1429 tol biopolymer transport system, periplasmic protein. (304 aa)    
Predicted Functional Partners:
EEG40796.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: fjo:Fjoh_2141 oxidoreductase domain protein.
 
      0.827
EEG41427.1
OmpA/MotB domain protein; PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: fps:FP1920 probable outer membrane protein, OmpA family.
  
 0.777
EEG41578.1
OmpA/MotB domain protein; PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: gfo:GFO_3374 OmpA/MotB family outer membrane protein containing thrombospondin 3 repeats.
  
 0.777
EEG41885.1
PFAM: OmpA/MotB domain protein; KEGG: abo:ABO_1992 hypothetical protein.
  
 0.777
EEG42097.1
OmpA/MotB domain protein; PFAM: Thrombospondin type 3 repeat; OmpA/MotB domain protein; KEGG: gfo:GFO_3374 OmpA/MotB family outer membrane protein containing thrombospondin 3 repeats.
  
 0.777
EEG40899.1
KEGG: afw:Anae109_2247 hypothetical protein.
    
 
 0.748
EEG42218.1
PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: dge:Dgeo_1926 dienelactone hydrolase-like protein.
 
     0.736
EEG41383.1
Peptidylglycine monooxygenase-like protein; KEGG: rba:RB9882 similar to peptidylglycine monooxygenase.
   
   0.735
EEG42221.1
Adenylate/guanylate cyclase with GAF and PAS/PAC sensors; TIGRFAM: PAS sensor protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; PAS fold domain protein; KEGG: swi:Swit_1477 putative adenylate/guanylate cyclase.
    
  0.669
EEG42382.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; SMART: Tetratricopeptide domain protein; KEGG: fps:FP0520 TPR-domain containing protein.
  
  
 0.623
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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