STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG42403.1PFAM: Abortive infection protein; KEGG: ooe:OEOE_1841 membrane-bound protease CAAX family. (260 aa)    
Predicted Functional Partners:
EEG42402.1
TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: hch:HCH_01287 predicted epimerase, PhzC/PhzF-like protein.
       0.568
EEG42404.1
Hypothetical protein; KEGG: ehi:82.t00025 Viral A-type inclusion protein repeat Pfam: Nha1_C DUF148 ERM Prefoldin_2 WXG100 Vicilin_N TBPIP Myosin_tail_1 Filament YscO Bacillus_HBL EzrA DUF948 Rab5-bind Laminin_I MpPF2 Vps51 MSG Spectrin LMP PROSITE: GLU_RICH LYS_RICH.
       0.519
EEG42241.1
KEGG: sus:Acid_6506 hypothetical protein.
 
    0.504
EEG42261.1
PFAM: nitroreductase; KEGG: chu:CHU_1678 NAD(P)H-flavin oxidoreductase.
 
    0.449
EEG42401.1
PFAM: amidohydrolase 2; KEGG: cak:Caul_0314 amidohydrolase 2.
       0.401
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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