STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEG42453.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
EEG42452.1
TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: sen:SACE_3061 NADH ubiquinone oxidoreductase, 20 kDa subunit.
       0.778
EEG42455.1
Hypothetical protein.
       0.748
EEG42456.1
Hypothetical protein.
       0.744
EEG42457.1
Hypothetical protein.
       0.744
EEG42454.1
Hypothetical protein.
       0.739
EEG42458.1
PFAM: nickel-dependent hydrogenase large subunit; KEGG: sma:SAV7367 cytochrome c3-like [NiFe] hydrogenase large subunit.
       0.660
EEG42459.1
Hypothetical protein.
       0.655
EEG42460.1
Hypothetical protein.
       0.655
EEG42461.1
Hypothetical protein.
       0.653
EEG42462.1
KEGG: gfo:GFO_2269 hypothetical protein.
       0.640
Your Current Organism:
Flavobacteria bacterium MS0242A
NCBI taxonomy Id: 487796
Other names: F. bacterium MS024-2A, Flavobacteria bacterium MS024-2A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.