Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKK66154.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family. (204 aa)    
Predicted Functional Partners:
AKK66153.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.863
AKK66155.1
Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.847
AKK66152.1
CMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.836
AKK69215.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.643
AKK67659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.633
AKK69324.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
AKK66764.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
AKK69506.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.591
AKK68211.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
AKK68033.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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