Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKK66426.1Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)    
Predicted Functional Partners:
AKK66427.1
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.761
AKK68059.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.720
AKK67785.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.712
AKK67646.1
Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
AKK66425.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.681
AKK66131.1
Avirulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
AKK66130.1
Avirulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
AKK69150.1
Peptidase S53; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
AKK67281.1
Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.581
AKK68572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.579
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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