STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK66529.1Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa)    
Predicted Functional Partners:
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
 
      0.849
AKK69397.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.646
pepQ
Proline dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position.
 
 
 0.589
AKK66530.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.546
AKK66006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
AKK66531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
AKK66861.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.509
AKK66336.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.507
AKK66532.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
AKK69318.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.497
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.