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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apaHBis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. (309 aa)    
Predicted Functional Partners:
apaG
Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.954
AKK67475.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.872
AKK66379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.858
AKK66613.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.858
AKK68158.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.858
AKK69506.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.858
AKK69245.1
Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.855
AKK66544.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.825
AKK68297.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.825
AKK69377.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.825
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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