STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK66777.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
AKK66776.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
AKK66778.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.934
AKK66775.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.834
AKK68696.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.751
AKK68698.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.742
AKK66421.1
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
AKK66793.1
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.699
AKK68699.1
Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.693
pilO
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.692
AKK66779.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.669
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.