Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKK66830.1Derived by automated computational analysis using gene prediction method: Protein Homology. (885 aa)    
Predicted Functional Partners:
AKK66832.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.498
AKK66831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.489
AKK66829.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
AKK66882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.467
AKK67191.1
Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.460
AKK67471.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.453
AKK67206.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
fusA
Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
   
 
 0.439
AKK68703.1
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.403
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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