STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK67066.1General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
AKK68404.1
Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.712
AKK69309.1
Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.712
AKK68837.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.674
AKK66128.1
DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.640
AKK67474.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.636
AKK66462.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
AKK69082.1
Biotin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.543
AKK66357.1
BrkB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.532
AKK69081.1
DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.523
AKK66119.1
Phytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.