STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK67133.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (921 aa)    
Predicted Functional Partners:
AKK66037.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.750
AKK69151.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
AKK66898.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
AKK68608.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.696
AKK67191.1
Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
tssJ
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
AKK67134.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.617
tagF
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
AKK65997.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.579
AKK68899.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.534
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.