Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKK67133.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (921 aa)    
Predicted Functional Partners:
AKK69151.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
AKK66037.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
AKK66898.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
AKK68608.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
AKK67191.1
Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
tssJ
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.621
tagF
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
AKK67134.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.546
AKK66244.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
AKK69318.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.509
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.