STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK67427.1Polysaccharide biosynthesis protein GumJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)    
Predicted Functional Partners:
AKK67426.1
GDP-mannose:glycolipid 4-beta-D-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
AKK67422.1
Polysaccharide biosynthesis protein GumD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.964
AKK67425.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.943
AKK67429.1
Polysaccharide biosynthesis protein GumL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.853
AKK67424.1
Polysaccharide biosynthesis protein GumF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.845
AKK67430.1
Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.
  
  
 0.839
AKK67428.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.822
AKK67420.1
Polysaccharide biosynthesis protein GumB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.820
AKK67423.1
Polysaccharide biosynthesis protein GumE; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.810
rfbB
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.792
Your Current Organism:
Xanthomonas translucens
NCBI taxonomy Id: 487909
Other names: X. translucens pv. undulosa, Xanthomonas translucens pv. undulosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.