Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKK67830.1 | AKK67838.1 | FD63_10260 | FD63_10300 | Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.966 |
| AKK67830.1 | AKK67846.1 | FD63_10260 | FD63_10340 | Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.741 |
| AKK67830.1 | flhF | FD63_10260 | FD63_10485 | Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Positive regulator of class III flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.804 |
| AKK67830.1 | fliE | FD63_10260 | FD63_10395 | Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar hook-basal body protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| AKK67830.1 | fliM | FD63_10260 | FD63_10435 | Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.995 |
| AKK67830.1 | fliS | FD63_10260 | FD63_10310 | Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar biosynthesis protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.962 |
| AKK67838.1 | AKK67830.1 | FD63_10300 | FD63_10260 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.966 |
| AKK67838.1 | AKK67844.1 | FD63_10300 | FD63_10330 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.495 |
| AKK67838.1 | AKK67846.1 | FD63_10300 | FD63_10340 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.854 |
| AKK67838.1 | AKK68362.1 | FD63_10300 | FD63_13150 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.403 |
| AKK67838.1 | flhF | FD63_10300 | FD63_10485 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Positive regulator of class III flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.638 |
| AKK67838.1 | fliE | FD63_10300 | FD63_10395 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-basal body protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.874 |
| AKK67838.1 | fliM | FD63_10300 | FD63_10435 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.871 |
| AKK67838.1 | fliS | FD63_10300 | FD63_10310 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar biosynthesis protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| AKK67844.1 | AKK67838.1 | FD63_10330 | FD63_10300 | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.495 |
| AKK67844.1 | AKK67845.1 | FD63_10330 | FD63_10335 | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.793 |
| AKK67844.1 | AKK67846.1 | FD63_10330 | FD63_10340 | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.978 |
| AKK67844.1 | AKK68362.1 | FD63_10330 | FD63_13150 | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.916 |
| AKK67844.1 | fliS | FD63_10330 | FD63_10310 | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Flagellar biosynthesis protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.643 |
| AKK67845.1 | AKK67844.1 | FD63_10335 | FD63_10330 | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.793 |
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