STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571385_00181Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_001571385_00973
Unannotated protein.
  
  
  0.922
GCA_001571385_00783
Unannotated protein.
    
  0.807
GCA_001571385_01679
Unannotated protein.
    
  0.807
GCA_001571385_00523
Unannotated protein.
    
 0.747
GCA_001571385_00812
Unannotated protein.
 
   
 0.682
GCA_001571385_02491
Unannotated protein.
  
  
 0.663
GCA_001571385_01353
Unannotated protein.
 
   
 0.642
GCA_001571385_01223
Unannotated protein.
  
  
 0.629
GCA_001571385_01675
Unannotated protein.
  
    0.612
GCA_001571385_01648
Unannotated protein.
 
  
  0.594
Your Current Organism:
Methanofollis ethanolicus
NCBI taxonomy Id: 488124
Other names: DSM 21041, JCM 15103, M. ethanolicus, Methanofollis ethanolicus Imachi et al. 2009, Methanofollis sp. HASU, NBRC 104120, strain HASU
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.