STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571385_00859Unannotated protein. (266 aa)    
Predicted Functional Partners:
GCA_001571385_00860
Unannotated protein.
 
 0.999
GCA_001571385_01334
Unannotated protein.
 
 0.991
GCA_001571385_01530
Unannotated protein.
  
 
 0.890
GCA_001571385_00862
Unannotated protein.
  
 
  0.807
GCA_001571385_00308
Unannotated protein.
  
 
 0.748
GCA_001571385_01700
Unannotated protein.
  
 
 0.748
GCA_001571385_01433
Unannotated protein.
 
    0.720
GCA_001571385_02619
Unannotated protein.
  
  
 0.604
GCA_001571385_00857
Unannotated protein.
       0.603
GCA_001571385_00858
Unannotated protein.
       0.603
Your Current Organism:
Methanofollis ethanolicus
NCBI taxonomy Id: 488124
Other names: DSM 21041, JCM 15103, M. ethanolicus, Methanofollis ethanolicus Imachi et al. 2009, Methanofollis sp. HASU, NBRC 104120, strain HASU
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.