STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571385_00932Unannotated protein. (361 aa)    
Predicted Functional Partners:
GCA_001571385_00906
Unannotated protein.
 
   
 0.601
GCA_001571385_00902
Unannotated protein.
 
    0.563
GCA_001571385_00933
Unannotated protein.
       0.563
GCA_001571385_00934
Unannotated protein.
 
     0.462
GCA_001571385_01551
Unannotated protein.
 
     0.458
GCA_001571385_02097
Unannotated protein.
 
     0.426
GCA_001571385_00340
Unannotated protein.
  
    0.405
Your Current Organism:
Methanofollis ethanolicus
NCBI taxonomy Id: 488124
Other names: DSM 21041, JCM 15103, M. ethanolicus, Methanofollis ethanolicus Imachi et al. 2009, Methanofollis sp. HASU, NBRC 104120, strain HASU
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.