STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571385_02270Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_001571385_02271
Unannotated protein.
 
     0.962
GCA_001571385_02272
Unannotated protein.
 
     0.960
GCA_001571385_02269
Unannotated protein.
 
     0.958
GCA_001571385_02268
Unannotated protein.
 
     0.953
GCA_001571385_02274
Unannotated protein.
 
     0.953
GCA_001571385_02273
Unannotated protein.
 
     0.949
GCA_001571385_02275
Unannotated protein.
 
     0.871
GCA_001571385_01265
Unannotated protein.
  
     0.680
GCA_001571385_01266
Unannotated protein.
  
     0.679
GCA_001571385_02266
Unannotated protein.
  
     0.677
Your Current Organism:
Methanofollis ethanolicus
NCBI taxonomy Id: 488124
Other names: DSM 21041, JCM 15103, M. ethanolicus, Methanofollis ethanolicus Imachi et al. 2009, Methanofollis sp. HASU, NBRC 104120, strain HASU
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.